Insertion junction: CLIP2.033371_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033371
Chromosome:chromosome 12
Location:9880619
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543477 (1 of 98) IPR023214 - HAD-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCATTGTTCGGCAAGTCGTGGAAACCTTGTGTCCCTCAAGGCCAACG
Internal bar code:TCAATATGCTATTGGGTCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGCGTGGTTGGAGTACTC
Suggested primer 2:TTACCCTACCCGGCTCATCA