Insertion junction: CLIP2.033374_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033374
Chromosome:chromosome 3
Location:5924283
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g188800 Nicotinate phosphoribosyltransferase; (1 of 1) PTHR11098//PTHR11098:SF2 - NICOTINATE PHOSPHORIBOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTTCCTGTCGGTGTTCCCATAAGCGTCTTGACGGACAGTTACAAGG
Internal bar code:GACTTAGGCAAGGCATATGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4071
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGGTACAAAGGCGTCCTG
Suggested primer 2:CCACGTCACTTGATCCCACA