Insertion junction: CLIP2.033375_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033375
Chromosome:chromosome 1
Location:1412545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007500 NSS1 (1 of 2) PTHR11819//PTHR11819:SF12 - SODIUM/SOLUTE SYMPORTER // HIGH-AFFINITY CHOLINE TRANSPORTER 1; Sodium:solute symporter intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTAGGAGAGGCAGCGGAAACAACCGCGCGGCGACCTCTGTGCCCCAA
Internal bar code:GTCCTAGGCGGGTATTCTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:90.3226
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTGCTGGGAATCTGGGTG
Suggested primer 2:TGTAGACACTGTGGCAGCAG