Insertion junction: CLIP2.033379_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033379
Chromosome:chromosome 13
Location:3904135
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g589870 (1 of 20) 3.1.4.17 - 3',5'-cyclic-nucleotide phosphodiesterase / Cyclic AMP phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCCTTGCAACTCATTCCCACGCCTTCCTTGCACCTCTAGCACAGTTCA
Internal bar code:GGATGGTCGAGTGTATTTTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:63.1579
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCTGTGCTGTGTGGGATA
Suggested primer 2:GGCTGGCCAAAAACCTGATG