Insertion junction: CLIP2.033380_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033380
Chromosome:chromosome 11
Location:2000178
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467768 (1 of 1) K10277 - lysine-specific demethylase 8 [EC:1.14.11.27] (KDM8, JMJD5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCCCCGCTCCACATCAGGCCCCAACCCCAACCCCCACGCCCCCAGCC
Internal bar code:TAGGGGCGGTGTGTCTGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2203
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCATACGTCAATCAACGCC
Suggested primer 2:ATCCAGATCCGTTGCCAAGG