Insertion junction: CLIP2.033381_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033381
Chromosome:chromosome 2
Location:1293139
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082400 (1 of 2) IPR000104//IPR001394//IPR028889 - Antifreeze protein, type I // Peptidase C19, ubiquitin carboxyl-terminal hydrolase // Ubiquitin specific protease domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGGCACCTGAGACACGCGACCCCGCCTGACTAGCTAACAAGCCACATG
Internal bar code:TCCACAGCTCGTTAGTACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1294
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAGAAGACAGGAGTGC
Suggested primer 2:CAAAATCAACAGGGCGTGGG