Insertion junction: CLIP2.033382_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033382
Chromosome:chromosome 3
Location:955935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800289 (1 of 2) IPR011043//IPR013783//IPR014756//IPR015202//IPR015916 - Galactose oxidase/kelch, beta-propeller // Immunoglobulin-like fold // Immunoglobulin E-set // Domain of unknown function DUF1929 // Galactose oxidase, beta-propeller intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGGCCAGGCTGCTATAAGTTCTTTGGAGCCTGGGGTCTTACTTTACA
Internal bar code:TTTTCATTCCAGTATGATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5152
LEAP-Seq percent confirming:96.5116
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:ATTAGTGCGTGGTGGGAGTG
Suggested primer 2:GCGGCAGCTACCCTTCATAT