Insertion junction: CLIP2.033383_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033383
Chromosome:chromosome 17
Location:4575971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g731850 SDR29 Short-chain dehydrogenase/reductase; (1 of 1) 1.3.1.34 - 2,4-dienoyl-CoA reductase (NADPH) / 4-enoyl-CoA reductase (NADPH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGGTGCAAATCACATAGGCTTGGGGCCCGCGATGGCAGCTCGACCA
Internal bar code:GAGGAGAATAGTGGTTTCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4036
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCGCAGCGGATACAAAG
Suggested primer 2:CGACAGCCTACTCAGCTAGC