Insertion junction: CLIP2.033400_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033400
Chromosome:chromosome 12
Location:4372915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g519450 (1 of 1) PTHR10219//PTHR10219:SF36 - GLYCOLIPID TRANSFER PROTEIN-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCTGACGCGGGTGTATCCTGGTGGCGGCCGCGGGGCGGGTGGGGCCG
Internal bar code:TGAGTGGGCGGGGCACCTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1200
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGATCTGACGAGGAGT
Suggested primer 2:CGTAGCATTTACGCTGCCAC