Insertion junction: CLIP2.033414_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033414
Chromosome:chromosome 5
Location:1332454
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241655 (1 of 24) IPR001478 - PDZ domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCCCCGGCCCAATGAAATAGGTCCCAGTGGGGTTACATTCATGATTA
Internal bar code:CTGTCAATTTGTCTTTTCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1215
LEAP-Seq percent confirming:96.0784
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTTTCGTTTCGACCGT
Suggested primer 2:ACAAGCGTCACGTCCATCTT