Insertion junction: CLIP2.033414_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033414
Chromosome:chromosome 6
Location:3462940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCTTTAAAGCTAGAAAGGGCAATAGCCTGAAGAACGCCGGGCCTAC
Internal bar code:AGCGGCGGTCATATCGCAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:347
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCAAGCTACCCCAACCTC
Suggested primer 2:ACACGGGTCATGTGGAAGTC