Insertion junction: CLIP2.033443_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033443
Chromosome:chromosome 7
Location:1902649
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325744 (1 of 1) PTHR19277//PTHR19277:SF102 - PENTRAXIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCACCCTCTCCCTCTTTCCCTCTTGGGCTCTTCCTTGGCCCCAGGACT
Internal bar code:TGGACTCTCGAATCTCGAGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCACAGAGAAGTGTAGCG
Suggested primer 2:GGGAAGTTATGGCGACCACA