Insertion junction: CLIP2.033452_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033452
Chromosome:chromosome 14
Location:2677883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g625625 FTSH11 FtsH-like membrane ATPase/metalloprotease; (1 of 2) IPR000642//IPR003593//IPR005936//IPR011704//IPR027417 - Peptidase M41 // AAA+ ATPase domain // Peptidase, FtsH // ATPase, dynein-related, AAA domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCGTGAAGCGAGGTTGCCCCATCGCGCCTAGTGGGTAGGGACGGGTCG
Internal bar code:TTTTTATAATCACAGTTGCACG

Confirmation - LEAP-Seq

LEAP-Seq distance:484
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCGTCCTCTTCTCCCTCCAG
Suggested primer 2:TCATTGCCACAGGTGAGACC