Insertion junction: CLIP2.033456_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033456
Chromosome:chromosome 10
Location:4833493
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g453300 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCCCAGACGTGGTTGCGCGCGAGCTGCAGCGGGACGCCGAGGGCTC
Internal bar code:TGCACTAGGAATTTTCAGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3821
LEAP-Seq percent confirming:99.0
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:100

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTGCCATCTTGACGTCT
Suggested primer 2:GATTCTGATTGCAGCAGCGG