Insertion junction: CLIP2.033481_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033481
Chromosome:chromosome 1
Location:5742547
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041150 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCATCGCATGTAACGCAGTGGCAATGGCATGGCTGTCCGCATTGT
Internal bar code:CGACTTGTTTGGTCGGTTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5767
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGCTACTGTCGCTGCTA
Suggested primer 2:CCAAGTTCATGGAGGTCGCT