Insertion junction: CLIP2.033486_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033486
Chromosome:chromosome 7
Location:3208140
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g333950 VPS45 (1 of 1) K12479 - vacuolar protein sorting-associated protein 45 (VPS45); SM/Sec1-family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACCCTATACCGCACACCCTGACAGACGCCTTTGCAGCCGCGTACCCAC
Internal bar code:GTGTGATGTTGACGTCCCCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1958
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCTTTGCACACGACATGG
Suggested primer 2:CTGGTAGCGGATTACGGGTC