Insertion junction: CLIP2.033491_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033491
Chromosome:chromosome 1
Location:5236613
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGACTCCGAGGCTTCATTGGAAAAATGACAGCAGGGCCTCCCGAGTTC
Internal bar code:GGGAGCTGAGGTGTAAGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4479
LEAP-Seq percent confirming:89.2857
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAAATCAACAAGTGCCCGGC
Suggested primer 2:AGGAGTCAATGCGCTTGGAA