Insertion junction: CLIP2.033491_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033491
Chromosome:chromosome 1
Location:5236614
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g036700 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCTTTTTGTACTGGCGCCCGCGTGAGTCGGCGTCGTGACGATGGCC
Internal bar code:GGGAGCTGAGGTGTAAGGTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:928
LEAP-Seq percent confirming:60.8696
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGTCAATGCGCTTGGAA
Suggested primer 2:AAAATCAACAAGTGCCCGGC