Insertion junction: CLIP2.033501_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033501
Chromosome:chromosome 3
Location:3723907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169050 (1 of 1) PTHR12183//PTHR12183:SF18 - UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN // RING-TYPE UBIQUITIN E3 LIGASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCGTGAGGGCCCGCGTCATGGGTGTGAGGAGAGGCACGCGCAGAGA
Internal bar code:TCTGCGAACGGTATCCTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3774
LEAP-Seq percent confirming:91.5254
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:ACGACTCACCGACTCCAGTA
Suggested primer 2:TACAAGTACGCAGCCACCTG