Insertion junction: CLIP2.033502_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033502
Chromosome:chromosome 1
Location:4646193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032150 FAP187 (1 of 2) PTHR22847//PTHR22847:SF442 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED; Flagellar Associated Protein 187 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGGCTCGGCAGTTACACTCCAGCCACACTCCCCGGGGGCCGCCAGCC
Internal bar code:GTTTTTGTAGTTTTCGCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1658
LEAP-Seq percent confirming:94.6429
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCAACGGAAACAACAGTC
Suggested primer 2:TGTACTCCACGTTGAACCGG