Insertion junction: CLIP2.033509_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033509
Chromosome:chromosome 7
Location:4997852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g347300 (1 of 2) K11135 - Pin2-interacting protein X1 (PINX1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATTTGAAGCGGGCCAAGGGACCTTTCGCGCCTACACCATGCGCGCTG
Internal bar code:TTTGGACCTCATAGGGTCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1778
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCAGGGCGGGTGATTTC
Suggested primer 2:CCTTTGCAGCAATGCAGTGT