Insertion junction: CLIP2.033519_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033519
Chromosome:chromosome 12
Location:1552814
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487600 CPS2 Putative cleavage and polyadenylation specificity factor 100 kDa subunit; (1 of 1) K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGATAATGCGGCGTGAAGACCATGGCCTCCGCTCCCCAATAACTGACT
Internal bar code:GCATTATCGGGCAATGTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1101
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAACACGCACACCTCCCT
Suggested primer 2:CCATCCACCGGCTCACTATC