Insertion junction: CLIP2.033521_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033521
Chromosome:chromosome 14
Location:1575439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618350 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCGGAGGCTGCCTCGGCGGCCGGCGACTTGCAGGCGGTCCAGCGCC
Internal bar code:GTTTGTAGGTAGAGTTATGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1292
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTCATCCAGTGTGTCTGC
Suggested primer 2:CGGTCCAGACGTCTCTAAGC