Insertion junction: CLIP2.033523_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033523
Chromosome:chromosome 8
Location:1358384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364050 (1 of 1) PTHR12802//PTHR12802:SF41 - SWI/SNF COMPLEX-RELATED // BRAHMA ASSOCIATED PROTEIN 155 KDA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATCCTCCCCCCATGGACTTCACGGACATCGGTAACAACGCGTCTACT
Internal bar code:ACTCTTTAGGTGAGGGTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAAAACACCATCACGGCTGC
Suggested primer 2:CTCACTGCCGCATATGCAAC