Insertion junction: CLIP2.033524_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033524
Chromosome:chromosome 7
Location:4651039
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g344668 (1 of 2) IPR000104//IPR004827 - Antifreeze protein, type I // Basic-leucine zipper domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCGGAGTCGGACCTCTCCTTGGTGGCGTGGGCCGCATTTCCCCGGTG
Internal bar code:ATGAGTGGACGCCGGACTTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GACACACACACACACACACG
Suggested primer 2:CTGCCATAGCTGCTACTGCT