Insertion junction: CLIP2.033538_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033538
Chromosome:chromosome 16
Location:7510895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g682363 (1 of 4) 2.4.1.229 - [Skp1-protein]-hydroxyproline N-acetylglucosaminyltransferase / transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAGGGTTTGAATGCACCACTTGGCAGTGGCCGCAGGCGTACACACG
Internal bar code:TATGCCAGCTTCATTACAGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:676
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGTCGTGCTCAAAGTCC
Suggested primer 2:GGGCAACTTTCAGCTTTGGG