Insertion junction: CLIP2.033548_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033548
Chromosome:chromosome 11
Location:4065338
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g480851 RRA3 (1 of 3) PTHR10994//PTHR10994:SF3 - RETICULON // ARABINOSYLTRANSFERASE; Reduced residual arabinose 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCCGAACAAATACACATAACGCCCCAGCTCCTTGCCCTCCTGCCCCCG
Internal bar code:CAGCTGCCTGCCGCGGAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:116
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCGGCACTTCACTTCAT
Suggested primer 2:CGTGGGTTTGAAACAGCAGG