Insertion junction: CLIP2.033553_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033553
Chromosome:chromosome 7
Location:6431104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g357900 (1 of 1) K08054 - calnexin (CANX) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTAAGGCCATCCGGTCCAGAGCCCACGCCCCAGCTGCCGGCCCCGGCC
Internal bar code:CCGCCTGTATTCTAGGGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1386
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGGCGTACCCTTAGTTA
Suggested primer 2:CGCCAATGAGCAGAACGATG