Insertion junction: CLIP2.033555_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033555
Chromosome:chromosome 17
Location:5497811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739250 FAP402 (1 of 2) IPR000014//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635//IPR029016 - PAS domain // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // GAF domain-like; Flagellar Associated Protein Kinase 402 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTGTCTGTGCCTGTGTGCGCGTACGCAGGTGGGCATTCCCTCCATCC
Internal bar code:ACTACCCGCCTCTCTCTTGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:96.1538
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTATGCACACACATGGT
Suggested primer 2:TCTTCTTTCCTGTGCCCGAC