Insertion junction: CLIP2.033573_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033573
Chromosome:chromosome 3
Location:4284647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGTGGTGGTGGAGATGGTTCCTGAGGTTTGGAGAAGGGCTGCCGCC
Internal bar code:TTGTTGCCTAATTTGGGCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2729
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGTTTTCTGCCGTACGC
Suggested primer 2:GCATACATCACCCGGCCATA