Insertion junction: CLIP2.033576_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033576
Chromosome:chromosome 3
Location:7470732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGGCTCTGACGGGGCGTTACACGCCTATTAGCTCCCAAGCGTACGG
Internal bar code:GGCTTGTTTAACGCCGTGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2040
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCATCACCATGAGCAT
Suggested primer 2:GTGGATCGAAGAAAGCGTGC