Insertion junction: CLIP2.033576_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033576
Chromosome:chromosome 3
Location:7470733
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCTACGAGGGACACTGGGGTTGGGGCCGTGCGGGATTTCCCGCGCC
Internal bar code:CGTGTGGTTCTGGGGGGGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3148
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGATCGAAGAAAGCGTGC
Suggested primer 2:AGCAGCATCACCATGAGCAT