Insertion junction: CLIP2.033599_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033599
Chromosome:chromosome 17
Location:5292228
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g802109 intron
Cre17.g802110 (1 of 20) PF01822 - WSC domain (WSC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTGCTGCAAGCCCAGGGGCAAGCCCACGCCCTCAGACCCGTCCCTTG
Internal bar code:TGGGCTACCAGAATACGTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1566
LEAP-Seq percent confirming:28.125
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCAGTCATACGCTCGCC
Suggested primer 2:ATTCCTGTTACCCCTGCAGC