Insertion junction: CLIP2.033603_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033603
Chromosome:chromosome 12
Location:5393995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529200 (1 of 1) PF13917 - Zinc knuckle (zf-CCHC_3) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGAAAAAAGCAGCCCAGAACTGCACGGTTTCTAAACAAGCGAGCTAC
Internal bar code:GACCATCGAGGCGTAGTGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4267
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGACAAAGCAACGCATG
Suggested primer 2:AGGTGTAGTGGCCAATCTGC