Insertion junction: CLIP2.033608_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033608
Chromosome:chromosome 5
Location:2035261
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g236500 (1 of 1) 3.5.1.23 - Ceramidase / Acylsphingosine deacylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCCCATCATGCTGGACGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
Internal bar code:TCCTGGATCGTTCTCGGCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2315
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCCTGCAGCACAAGATA
Suggested primer 2:TGTGATTTTGGGCCCAAGGT