Insertion junction: CLIP2.033628_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033628
Chromosome:chromosome 2
Location:5269730
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g112600 (1 of 3) PTHR13780//PTHR13780:SF49 - AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTATGAAGTGCAGTGGTGGTGGGGGAGCACGGGGAGGGGAGGGGGCAGGC
Internal bar code:TATCATTCCTATCTTTGATACG

Confirmation - LEAP-Seq

LEAP-Seq distance:198
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGCAAGCGATCCAAAA
Suggested primer 2:GCGAGATCAGGTGAGAGACG