Insertion junction: CLIP2.033636_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033636
Chromosome:chromosome 3
Location:3758122
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGCGTCCCCAGCTCCTACGACACTCACCAGTCCGCTAACATGAGGCC
Internal bar code:GCCGCGTGCAAACATGGTATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4596
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGACGACTGTGGTACAAA
Suggested primer 2:CTGACCCTCACTTTCCGCTT