Insertion junction: CLIP2.033647_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033647
Chromosome:chromosome 10
Location:946363
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424500 CPK4 (1 of 1) K00852 - ribokinase (rbsK, RBKS); putative carbohydrate kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCCACTCCGAGCCTCCCCTCCACCTGGGTCTCAGAAAGTCTGGACTT
Internal bar code:ATCACACGACACGCCGGGTAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTTTAGCTCGGTGTCCT
Suggested primer 2:CAGCATCATCATTGTGGGCG