Insertion junction: CLIP2.033655_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.033655
Chromosome:chromosome 1
Location:1437647
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCTGCTTGTCGCCCGGCTGCTGCTGCTGGTGTCGCTGCTGCTGTTGCT
Internal bar code:TGTGGAGGATTCATTCACTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTGACTGCGTGTGTGTGAAC
Suggested primer 2:TAAACGCAACCCCTCCCTTC