Insertion junction: CLIP2.033665_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033665
Chromosome:chromosome 9
Location:6648349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416450 (1 of 14) PF04577 - Protein of unknown function (DUF563) (DUF563) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAATCCCCTGTCCGCTGGCTGGCCTTTCGCTGGGGGTGTCGGCAGGTG
Internal bar code:CCAGAAGAGATGTGATCGACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3620
LEAP-Seq percent confirming:85.2273
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCAGTGAGTGAAGTGGA
Suggested primer 2:CGACGTACCATAGGCCTGAC