Insertion junction: CLIP2.033670_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033670
Chromosome:chromosome 9
Location:2199867
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395300 (1 of 1) PTHR11736//PTHR11736:SF14 - MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN // MAGE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGTGTGCTTCCATGCATCCTACATGTTCATCCCATCCCATCCCGAT
Internal bar code:AGGAGTAAGCAGTCATAGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1494
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAAGGAGCAACAGCCACC
Suggested primer 2:CATGAGGAGTACCAGGACGC