Insertion junction: CLIP2.033687_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.033687
Chromosome:chromosome 3
Location:3852276
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170300 SUB5 (1 of 1) 3.4.24.30 - Coccolysin / Streptococcus thermophilus intracellular proteinase; Subtilisin-like protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAGTTGGTGCTGCGTGTCTCCAGCGGGACCGAGGCGTTGGCGGGCGA
Internal bar code:ATTATCGGGTAGGGGTATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:715
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAAGGATGGGGGTGGG
Suggested primer 2:GAAAGCGTGTTCTTGGCGTT