Insertion junction: CLIP2.033688_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.033688
Chromosome:chromosome 8
Location:1592628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g365600 THI1 Thiamine biosynthetic enzyme; (1 of 1) 2.7.4.7 - Phosphomethylpyrimidine kinase / Hydroxymethylpyrimidine phosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGAGTCCTCCCGGTGAAGGGTTGCCCTACCTTTCCTCGCCATGTCTG
Internal bar code:GGAGACAGAATCAAGTCGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:188
LEAP-Seq percent confirming:81.25
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACACAAACACGCACGC
Suggested primer 2:GACTTCTGAGCAAGGGCCAT