Insertion junction: CLIP2.033699_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.033699
Chromosome:chromosome 13
Location:2746216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTGTATACAAGCGTCGGGCGGCGATGGTGGGCCTTGCGTGGTGGCGC
Internal bar code:GAACGTACTTTTTAAATCCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1302
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTAGGGCCAAGCATCCAAGG
Suggested primer 2:ACAACCCTTACGTACTGCGG