Insertion junction: CLIP2.033702_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.033702
Chromosome:chromosome 8
Location:3209846
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g376740 (1 of 1) IPR008979//IPR018392 - Galactose-binding domain-like // LysM domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCTTCTTCTGCGGGCCCGTGCCCACGCCTGACCCGGACCGATCCCT
Internal bar code:GCTACCTTGGGGTGTCAATTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2652
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAGGCCTACGGTATCAGC
Suggested primer 2:GCTGCATTCCTTACCTGGGT