Insertion junction: CLIP2.033703_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033703
Chromosome:chromosome 6
Location:4841108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACTGCTTAACCGTGGGTCCGCGGCTGCCCTGCCAACCTGATCACAAC
Internal bar code:TAAAGCTGTCGGTCATCCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3312
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAATACAGCCAACATGCG
Suggested primer 2:ACGCAGGGCATTGTCATGTA