Insertion junction: CLIP2.033726_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.033726
Chromosome:chromosome 2
Location:3394394
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098500 (1 of 12) PF04749 - PLAC8 family (PLAC8) intron
Cre02.g098550 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCCTTCCGTACAAGGTTTGGATGCCCGGCCTCCCGGCCCCGACCAGGG
Internal bar code:TATGATGTGTGGTCCGCCCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:994
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTGTGCTGGTACTGGTCG
Suggested primer 2:ACACATACACGCAAGACCGT