Insertion junction: CLIP2.033735_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033735
Chromosome:chromosome 2
Location:5507355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g114575 (1 of 20) IPR010095//IPR013083 - Transposase IS605, OrfB, C-terminal // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACACGGGATGACACAGGGCGGTTTGGAGATGATACGGGTGACACACG
Internal bar code:GAAACAGGGAAAGTGGCTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1976
LEAP-Seq percent confirming:51.8519
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGCAAGGGAAAAGTGGGC
Suggested primer 2:CCACTCACCTTCACCCACTC