Insertion junction: CLIP2.033747_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.033747
Chromosome:chromosome 9
Location:3278203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g395028 (1 of 2) PF02470 - MlaD protein (MlaD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAGCCCGACGCCCCGGCCCTGGCCCCAGCCCCGGTCCTGGCCCCGGC
Internal bar code:CGCTCAATTCATAAAAGACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1067
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGCAGCGCATCAACTTC
Suggested primer 2:GGATGCTCTAAGCCAGGGAC