Insertion junction: CLIP2.033754_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.033754
Chromosome:chromosome 16
Location:541100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692550 MSH4 DNA mismatch repair protein, MutS homolog; (1 of 1) K08740 - DNA mismatch repair protein MSH4 (MSH4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAAGTGTGTGTCGTACATGTGTATGCTTGTAATATTGTGTGGTTTAA
Internal bar code:AGTATGTTCCTTATTGTATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TACCCGTGCCCATACCTGTA
Suggested primer 2:TATGGACAGGAGGTGGGAGG